Assembly Summary | |
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Date Published | November 30, 2020 |
Length | 2,187,613 nt |
Sequencing Technology | Illumina + Oxford Nanopore Hybrid Assembly |
Number of Contigs | 1 (All Circularized) |
Assembly Level | None |
N50 | 2,187,613 nt |
%GC | 40.59% |
Organism Summary | |
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Name | ATCC® 10558™ |
Isolation | Patient with subacute bacterial endocarditis |
Tags | Type Strain |
Biosafety Level | 2 |
Type Strain | Yes |
Antigenic Properties | Biotype 2, Type I-II |
Annotations Summary | |
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Number of CDS | 2,052 |
Number of Hypothetical Proteins | 181 |
Number of tRNA | 59 |
Number of 5s rRNA | 4 |
Number of 16s rRNA | 4 |
Number of 23s rRNA | 4 |
Input Reads Summary | |
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Oxford Nanopore Read Count | 208,687 |
Oxford Nanopore Median Q Score | 26 |
Illumina Read Count | 17,475,685 |
Illumina Mean Coverage Depth | 1,093.102× |
Illumina Median Q Score | 34 |
Contig | Start | End | Name | Protein Product | EC Number | Type | RefSeq ID | Jump |
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No genomes with >95% similarity found.
No genomes found sharing the same genus.