| Enterococcus avium | Type Strain | ATCC® 14025™ | October 31, 2023 | 4.7 Mb | | |
| Enterococcus caccae | Type Strain | ATCC® BAA-1240™ | November 26, 2024 | 3.6 Mb | | |
| Enterococcus casseliflavus | Type Strain | ATCC® 25788™ | April 10, 2024 | 3.5 Mb | | |
| Enterococcus casseliflavus | | ATCC® 700327™ | September 29, 2020 | 3.5 Mb | | |
| Enterococcus casseliflavus | | ATCC® 700668™ | February 25, 2023 | 3.7 Mb | | |
| Enterococcus cecorum | Type Strain | ATCC® 43198™ | February 25, 2023 | 2.4 Mb | | |
| Enterococcus dispar | Type Strain | ATCC® 51266™ | September 4, 2024 | 2.8 Mb | | |
| Enterococcus durans | Type Strain | ATCC® 19432™ | October 28, 2020 | 3.1 Mb | | |
| Enterococcus durans | | ATCC® 49607™ | October 31, 2023 | 3.2 Mb | | |
| Enterococcus durans | | ATCC® 11576™ | February 1, 2024 | 3.2 Mb | | |
| Enterococcus durans | | ATCC® 6056™ | December 15, 2021 | 3.3 Mb | | |
| Enterococcus faecalis | | ATCC® 29212™ | February 26, 2020 | 3.0 Mb | | |
| Enterococcus faecalis | | ATCC® BAA-2365™ | July 30, 2021 | 3.5 Mb | | |
| Enterococcus faecalis | | ATCC® 14506™ | March 5, 2024 | 3.0 Mb | | |
| Enterococcus faecalis | | ATCC® BAA-2128™ | September 2, 2021 | 3.0 Mb | | |
| Enterococcus faecalis | | ATCC® 9854™ | November 30, 2020 | 2.9 Mb | | |
| Enterococcus faecalis | | ATCC® 49532™ | September 2, 2021 | 2.9 Mb | | |
| Enterococcus faecalis | MSA Component | ATCC® 700802™ | May 14, 2019 | 3.4 Mb | | |
| Enterococcus faecalis | | ATCC® 49757™ | June 3, 2024 | 3.2 Mb | | |
| Enterococcus faecalis | Type Strain | ATCC® 19433™ | December 15, 2021 | 2.9 Mb | | |
| Enterococcus faecalis | | ATCC® 11420™ | July 1, 2021 | 3.0 Mb | | |
| Enterococcus faecalis | | ATCC® 828™ | November 30, 2020 | 3.0 Mb | | |
| Enterococcus faecalis | | ATCC® 51575™ | August 31, 2020 | 3.5 Mb | | |
| Enterococcus faecalis | | ATCC® 11700™ | February 25, 2023 | 2.9 Mb | | |
| Enterococcus faecalis | | ATCC® 43062™ | June 3, 2024 | 2.9 Mb | | |
| Enterococcus faecalis | | ATCC® 49533™ | October 29, 2021 | 3.0 Mb | | |
| Enterococcus faecalis | | ATCC® 51299™ | August 3, 2020 | 3.4 Mb | | |
| Enterococcus faecalis | | ATCC® 7080™ | April 28, 2023 | 2.8 Mb | | |
| Enterococcus faecalis | | ATCC® 33186™ | December 12, 2022 | 2.8 Mb | | |
| Enterococcus faecalis | | ATCC® BAA-2573™ | December 23, 2021 | 3.0 Mb | | |